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BI1339

Experimental approaches in plant growth analysis and phenotyping

•Lectures


Seminars (obligatory)


Projekt work (obligatory)


Exercises (obligatory)


Own studies


Examination and evaluation


•The course deals with the basic methods for measuring and assessing growth and physiology of plants in relation to the surrounding environment (plant-environment and plant-plant interaction), training the students’ ability to apply some of these methods in practical project work, provide a basic understanding of plant growth modeling, and an overview of automated methods to rapidly measure structural and functional plant properties (so called phenotyping) in modern plant phenotyping facilities.


Topics covered by this course are:



  • Growth analysis and functional physiology of agricultural and forest plants



  • Plant-environment and plant-plant interaction



  • Experimental design and basic statistics for the analysis of scientific results



  • Growth modeling of plants



  • Modern phenotyping methods for plants, i.e. technical solutions for rapid and automated quantification of structural and functional plant properties in large quantities of plant individuals.




Course evaluation

The course evaluation is now closed

BI1339-10154 - Course evaluation report

Once the evaluation is closed, the course coordinator and student representative have 1 month to draft their comments. The comments will be published in the evaluation report.

Additional course evaluations for BI1339

Academic year 2022/2023

Experimental approaches in plant growth analysis and phenotyping (BI1339-10352)

2022-08-29 - 2022-10-31

Academic year 2019/2020

Experimental approaches in plant growth analysis and phenotyping (BI1339-10125)

2019-09-02 - 2019-10-31

Syllabus and other information

Litterature list

Course literature

BI1339 – Experimental approaches in plant growth analysis and phenotyping, 15 hp

Course leader: Martin Weih (martin.weih@slu.se)

The main course literature will be Lambers H, Chapin FS III, Pons TL (2008), Plant Physiological Ecology, Springer. An online version of this book is available from the SLU library at https://link.springer.com/book/10.1007%2F978-0-387-78341-3

Reference will be made to specific chapters of the main course literature by the teachers responsible for each teaching unit, through the course Canvas page.

In addition to the above course literature, other sources will be part of the course literature. In some cases, supporting (more basic) readings and additional (more advanced) readings will be listed (and clearly indicated) at the course Canvas page**. **All compulsory literature will be made available to the students enrolled through the course Canvas page.

The additional course literature includes the following titles (selection):

Araus JL, Kefauver SC (2018) Breeding to adapt agriculture to climate change: affordable phenotyping solutions. Current Opinion in Plant Biology 45, 237-247.

Chawade A, Van Ham J, Blomquist H, Bagge O, Alexandersson E, Ortiz R (2019) High-Throughput Field-Phenotyping Tools for Plant Breeding and Precision Agriculture. Agronomy 2019, 9, 258.

Connolly J, Wayne P, Bazzaz FA (2001) Interspecific Competition in Plants: How Well Do Current Methods Answer Fundamental Questions? The American Naturalist 157: 107-125.

Fiorani F, Schurr U (2013) Future Scenarios for Plant Phenotyping. Annual Review of Plant Biology 64:1, 267-291.

Fowler J, Cohen L, Jarvis P () Practical Statistics for Field Biology. Wiley.

Golzarian M, Frick R, Rajendran K, Berger B, Roy S, et al. 2011. Accurate inference of shoot biomass from high-throughput images of cereal plants. Plant Methods 7:2

Larcher W (2003) Physiological Plant Ecology, Springer, p. 111-119.

Poorter H, Niinemets Ü, Walter A, Fiorani F, Schurr U. 2010. A method to construct dose–response curves for a wide range of environmental factors and plant traits by means of a meta-analysis of phenotypic data. J. Exp. Bot. 61:2043–55

Weih M, Westerbergh A, Lundquist P-O (2017), Role of nutrient-efficient plants for improving crop yields: bridging plant ecology, physiology, and molecular biology, Hossain MA et al (Eds), Plant macronutrient use efficiency – Molecular and genomic perspectives in crop plants, Elsevier, p. 31-44.

Please note that all compulsory literature will be made available to the students enrolled through the course Canvas page.

Course facts

The course is offered as an independent course: Yes The course is offered as a programme course: Plant Biology for Sustainable Production - Master's Programme Plant Biology for Sustainable Production - Master's programme Tuition fee: Tuition fee only for non-EU/EEA/Switzerland citizens: 38060 SEK Cycle: Master’s level (A1N)
Subject: Agricultural Science Biology Biology Agricultural science
Course code: BI1339 Application code: SLU-10154 Location: Uppsala Distance course: No Language: English Responsible department: Department of Crop Production Ecology Pace: 100%