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Hadrien Gourlé

Hadrien Gourlé


I'm a bioinformatician and PhD-student at the Swedish University of Agricultural Sciences.

My PhD is about assessing the anthropogenic impact on West Indian Ocean coral reefs.


I'm also an open source enthusiast with a great interest in teaching and making knowledge more inclusive and free.


Sveriges Lantbruksuniversitet – Uppsala, Sweden

Research Assistant


Sveriges Lantbruksuniversitet – Uppsala, Sweden

Master of Science - Biology


Haute école en Hainaut – Mons, Belgium

Bachelor in Biotechnology - Bioinformatics

Selected publications

Louyakis AS, Gourlé H, Casaburi G, Bonjawo RM, Duscher AA, Foster JS. A year in the life of a thrombolite: comparative metatranscriptomics reveals dynamic metabolic changes over diel and seasonal cycles. Environmental microbiology. 2018 Feb 1;20(2):842-61.

Hernández-de-Diego R, de Villiers EP, Klingström T, Gourlé H, Conesa A, Bongcam-Rudloff E. The eBioKit, a stand-alone educational platform for bioinformatics. PLoS computational biology. 2017 Sep 14;13(9):e1005616.

Norling M, Karlsson-Lindsjö OE, Gourlé H, Bongcam-Rudloff E, Hayer J. MetLab: An In Silico Experimental Design, Simulation and Analysis Tool for Viral Metagenomics Studies. PloS one. 2016 Aug 1;11(8):e0160334.

Zubair S, Fischer A, Liljander A, Meens J, Hegerman J, Gourlé H, Bishop RP, Roebbelen I, Younan M, Mustafa MI, Mushtaq M, Bongcam-Rudloff E, Jores J. Complete genome sequence of Staphylococcus aureus, strain ILRI_Eymole1/1, isolated from a Kenyan dromedary camel. Stand Genomic Sci. 2015. doi: 10.1186/s40793-015-0098-6.

Fischer A, Santana-Cruz I, Hegerman J, Gourlé H, Schieck E, Lambert M, Nadendla S, Wesonga H, Miller RA, Vashee S, Weber J, Meens J, Frey J, Jores J. High quality draft genomes of the Mycoplasma mycoides subsp. mycoides challenge strains Afadé and B237. Stand Genomic Sci. 2015 doi: 10.1186/s40793-015-0067-0.



Non employee at the Department of Animal Breeding and Genetics; Bioinformatik