Aurélien Saghaï
Presentation
I study archaea and bacteria involved in various nitrogen transformations (i.e. nitrification, denitrification and nitrate ammonification [DNRA]) in agricultural soils and in the crop microbiome. Understanding the ecology and evolution of these microorganisms, in particular how they interact with crops, is central to the design of agricultural practices that increase nitrogen use efficiency and contribute to mitigate both climate change and environmental pollution.
In my research I use a a multifaceted approach combining comparative (meta)genomics, greenhouse experiments, field surveys and phylogenetics.
Teaching
I am course leader for the bachelor course Molecular and Microbial Ecology (BI1438).
Research
Funded grant applications:
- The many faces of nitrate ammonifying bacteria – Unraveling their role in nitrogen retention and loss, and nitrous oxide emissions in terrestrial ecosystems. Swedish Research Council VR. PI S. Hallin, SLU (2024-2027)
- Harnessing plant traits to retain nitrogen in the rhizosphere. Swedish Research Council Formas. PI A. Saghaï (2022-2025).
Background
I received a bachelor degree in Molecular Biology (2011) and a master degree in Microbiology (2013) from the University Paris-Sud (now Paris-Saclay). In December 2016 I completed my PhD on the phylogenetic and functional diversity of microbial mats in different environments under the supervision of Dr. Purificación López-García (Diversity, Ecology and Evolution of Microbes Group, Paris-Saclay University). I joined the Soil Microbiology Group led by Pr. Sara Hallin at the Dept. of Forest Mycology and Plant Pathology at SLU in 2017 as a post-doc to give a more applied perspective to my research. I have a researcher position in this group since March 2021.
Supervision
PhD students
Laura J Müller (co-supervisor; 2021-): Ecotoxicity of pesticides on nitrifiers in soil under a climate change scenario.
Master students
Elin Almén (main supervisor; 2021)
Frida Lindvall (main supervisor; 2022): Controls of the partitioning of nitrate between DNRA and denitrifiers.
Selected publications
The full list of peer-reviewed publications can be found here.