CV-sida

Patrik Waldmann

Patrik Waldmann

Presentation

Docent, Beijerforskare

Forskning

  • Statistisk genetik och bioinformatik
  • Högdimensionell dataanalys och statistisk maskininlärning
  • Bayesiansk statistik
  • Precisionsmodellering inom djurvetenskaperna

Bakgrund

  • Doktor, Kvantitativ genetik, Lunds univesitet, 2000
  • Post doc, Genetik, Uleåborgs universitet, 2001-2003
  • Post doc, Statistik, Helsingfors universitet, 2003
  • Forskarassistent, Kvantitativ genetik och trädförädling, SLU Umeå, 2004-2009
  • Senior forskare, Statistisk genetik, BOKU Wien, 2010-2012
  • Senior lektor, Statistik, Linköpings universitet, 2012-2015

Publikationer i urval

Waldmann, P. 2016. Genome-wide prediction using Bayesian additive regression trees. GENETICS SELECTION EVOLUTION 48:42. DOI: 10.1186/s12711-016-0219-8

Weinwurm, S, Sölkner, J, Waldmann, P. 2013. The effect of linkage disequilibrium on Bayesian genome-wide association studies. JOURNAL OF BIOMETRICS & BIOSTATISTICS 4:180. doi: 10.4172/2155-6180.1000180

Waldmann, P, Meszaros, G, Gredler, B, Furst, C, Sölkner, J. 2013. Evaluation of the lasso and the elastic net in genome-wide association studies. FRONTIERS IN GENETICS 4:270. doi: 10.3389/fgene.2013.00270

Sillanpää, MJ, Pikkuhookana, P, Abrahamsson, S, Knurr, T, Fries, A, Lerceteau, E, Waldmann, P, Garcia-Gil, MR. 2012. Simultaneous estimation of multiple quantitative trait loci and growth curve parameters through hierarchical Bayesian modeling. HEREDITY 108: 134-146. doi: 10.1038/hdy.2011.56

Hallander, J, Waldmann, P, Wang, CK, Sillanpää, MJ. 2010. Bayesian inference of genetic parameters based on conditional decompositions of multivariate normal distributions. GENETICS 185: 645-654. doi:  10.1534/genetics.110.114249

Banerjee, S, Finley, AO, Waldmann, P, Ericsson, T. 2010. Hierarchical spatial process models for multiple traits in large genetic trials. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION 105: 506-521. doi:  10.1198/jasa.2009.ap09068

Finley, AO, Banerjee, S, Waldmann, P, Ericsson, T. 2009. Hierarchical spatial modeling of additive and dominance genetic variance for large spatial trial datasets. BIOMETRICS 65: 441-451. doi:  10.1111/j.1541-0420.2008.01115.x

Waldmann, P, Hallander, J, Hoti, F, Sillanpää, MJ. 2008. Efficient Markov chain Monte Carlo implementation of Bayesian analysis of additive and dominance genetic variances in noninbred pedigrees. GENETICS 179: 1101-1112. doi:  10.1534/genetics.107.084160

Corander, J, Waldmann, P, Marttinen, P, Sillanpää, MJ. 2004. BAPS 2: enhanced possibilities for the analysis of genetic population structure. BIOINFORMATICS 20: 2363-2369. doi: 10.1093/bioinformatics/bth250

Corander, J, Waldmann, P, Sillanpää, MJ. 2003. Bayesian analysis of genetic differentiation between populations. GENETICS 163: 367-374.