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Paula A. Gomez-Zapata

Paula Gomez Zapata
Postdoctoral researcher working on the lifecycle switch of Cronartium pini through comparative genomics.

Presentation

I am a researcher in Plant Pathology with an interest in fungal diseases of plants. I am passionate about exploring biological control strategies and employing bioinformatic tools to control fungal pathogens.

I studied BSE in Agronomic Engineering at Universidad Nacional de Colombia (UNAL) with a major in Phytopathology. While I was an undergraduate student, I did an internship for six months at Purdue University in the United States at the Arthur Fungarium, screening rust specimens for the presence of natural enemies of rust fungi. After finishing my undergraduate studies, I carried out a Ph.D. in Plant Pathology at Purdue University, which was focused on the characterization of the natural enemies of rust fungi by studying their species diversity, host-specificity for rust fungi, biogeography, and interaction events between these natural enemies and rusts. These projects led me to gain skills and experience in fieldwork, bioinformatics, phylogenetic analyses, genome assemblies, rust species identification, fungal cultures, biotrophic fungi, GFP fungal transformation, and molecular biology techniques, such as DNA extraction, PCR, primers design, and experience in troubleshooting these techniques. I also gained experience teaching biology courses to undergraduate students and training them in research.

I worked as a postdoctoral researcher for a period of eight months at Purdue University on the NSF project: PurSUiT Microfungi. This project aims to study obligate microfungi that are parasites of plants and animals from tropical ecosystems whose diversity and records are almost completely unknown. My role in the project focused on studying the diversity of rust fungi. This project let me gain new skills in analyzing data from multiplexed next-generation sequencing and identification of rust species through morphological features and molecular data. 

I am currently a postdoctoral researcher at the Swedish University of Agricultural Sciences (SLU) in the Department of Forestry Mycology and Plant Pathology and guest researcher at Utrecht University (UU) in the microbial genome evolution team. The project I am working on investigate the genomic features that drive the switch between the heteroecious and autoecious forms in Cronartium pini, as a model system for the evolution of rust fungi. This project will let me gain new skills in fungal population genomics.

I enjoy collaborations, learning, and continuing to develop new skills.

Feel free to contact me :)

Teaching

As a teaching assistant at Purdue University (from Aug. 2018 to July 2022), I guided undergraduate students in laboratory and recitation sessions on two courses, Introduction to Plant Science and Fundamentals of Biology. I also trained undergraduate students pursuing a B.Sc. in Plant Science to learn new techniques in molecular biology, such as DNA extraction, PCR, electrophoresis, sequence editing, pure fungal isolation, and microscope usage.

Research

Areas of interest: Biocontrol, Bioinformatics, Mycology, Genomics, Rust fungi.

Background

Nov 2023 - Present. Postdoctoral researcher at the Swedish University of Agricultural Sciences (SLU) and guest researcher at Utrecht University (UU).

   Research Topic: Evolution of Rust Fungi.

Jan-Oct. 2023. Postdoctoral researcher. Botany and Plant Pathology, Purdue University.

   Research Topic: Species diversity of Rust fungi.

Dec. 2022. Ph.D. Plant Pathology, Purdue University.

   Research Topic: Characterization of the natural enemies of Rust fungi.

Dec. 2015. Agronomic Engineer. Major in Plant Pathology, National University of Colombia.

Supervision

Åke Olson, Department of Forest Mycology and Plant Pathology – SLU Uppsala.

Mikael Brandström Durling, Department of Forest Mycology and Plant Pathology – SLU Uppsala.

M.F. (Michael) Seidl, Microbial Genome Evolution Team, Utrecht University.


Contact

Postdoctor at the Department of Forest Mycology and Plant Pathology; Division of Forest Pathology
Postal address:
Skoglig mykologi och växtpatologi , Box 7026
750 07 UPPSALA
Visiting address: Almas Allé 5, Uppsala