Kontaktinformation
Eva Johansson, Professor, Programledare C4F
Institutionen för växtförädling
eva.johansson@slu.se, 040-415 562
Michael Gundale, Professor, Programledare T4F
Vetenskapligt granskade publikationer från TC4F sorterat efter år
Klicka på de expanderbara fälten nedan för att läsa listorna från respektive år.
Bandau F, Albrectsen BR, Robinson KM, Gundale MJ.
European aspen with high compared to low constitutive
tannin defenses grow taller in response to anthropogenic
nitrogen enrichment. Forest Ecology and Management.
2020;487:118985.
Forsmark B, Nordin A, Rosenstock NP, Wallander
H, Gundale MJ. Anthropogenic nitrogen enrichment
increased the efficiency of belowground biomass
production in a boreal forest. Soil Biology and Biochemistry.
2021;155:108154.
Gratz R, Ahmad I, Svennerstam H, Jämtgård S, Love J,
Holmlund M, et al. Organic nitrogen nutrition: LHT1.2 protein
from hybrid aspen (Populus tremula L. x tremuloides Michx)
is a functional amino acid transporter and a homolog of
Arabidopsis LHT1. Tree Physiol. 2021;41(8):1479-96.
Grau-Andrés R, Pingree MRA, Öquist MG, Wardle DA,
Nilsson M-C, Gundale MJ. Biochar increases tree biomass in
a managed boreal forest, but does not alter N2O, CH4, and
CO2 emissions. GCB Bioenergy. 2021;13(8):1329-42.
Gundale MJ. The impact of anthropogenic nitrogen
deposition on global forests: Negative impacts far exceed
the carbon benefits. Glob Chang Biol. 2022;28(3):690-2.
Hupperts SF, Gerber S, Nilsson MC, Gundale MJ. Empirical
and Earth system model estimates of boreal nitrogen
fixation often differ: A pathway toward reconciliation. Glob
Chang Biol. 2021;27(22):5711-25.
Ibáñez TS, Wardle DA, Gundale MJ, Nilsson M-C. Effects of
Soil Abiotic and Biotic Factors on Tree Seedling Regeneration
Following a Boreal Forest Wildfire. Ecosystems. 2020.
Gundale MJ, Kardol P. Multi-dimensionality as a path
forward in plant-soil feedback research. Journal of Ecology.
2021;109(10):3446-65.
Kelly J, Ibáñez TS, Santín C, Doerr SH, Nilsson MC, Holst T,
et al. Boreal forest soil carbon fluxes one year after a wildfire:
Effects of burn severity and management. Glob Chang Biol.
2021;27(17):4181-95.
Lim H, Jämtgård S, Oren R, Gruffman L, Kunz S, Näsholm
T. Organic nitrogen enhances nitrogen nutrition and
early growth of Pinus sylvestris seedlings. Tree Physiol.
2022;42(3):513-22.
Nuske SJ, Fajardo A, Nuñez MA, Pauchard A, Wardle DA,
Nilsson MC, et al. Soil biotic and abiotic effects on seedling
growth exhibit context-dependent interactions: evidence
from a multi-country experiment on Pinus contorta
invasion. New Phytol. 2021;232(1):303-17.
Pérez-Izquierdo L, Clemmensen KE, Strengbom J,
Granath G, Wardle DA, Nilsson M-C, et al. Crown-fire severity
is more important than ground-fire severity in determining
soil fungal community development in the boreal forest.
Journal of Ecology. 2021;109(1):504-18.
Phillips HRP, Bach EM, Bartz MLC, Bennett JM, Beugnon
R, Briones MJI, Gundale M. et al. Global data on earthworm
abundance, biomass, diversity and corresponding
environmental properties. Sci Data. 2021;8(1):136.
Plett KL, Buckley S, Plett JM, Anderson IC, LundbergFelten J, Jämtgård S. Novel Microdialysis Technique Reveals
a Dramatic Shift in Metabolite Secretion during the Early
Stages of the Interaction between the Ectomycorrhizal
Fungus. Microorganisms. 2021;9(9).
Senior JK, Gundale MJ, Iason GR, Whitham TG, Axelsson
EP. Progeny selection for enhanced forest growth alters soil
communities and processes. Ecosphere. 2022;13(2):e3943.
Spitzer CM, Lindahl B, Wardle DA, Sundqvist MK,
Gundale MJ, Fanin N, et al. Root trait-microbial relationships
across tundra plant species. New Phytol. 2021;229(3):1508-
20.
Spitzer CM, Wardle DA, Lindahl BD, Sundqvist MK,
Gundale MJ, Fanin N, et al. Root traits and soil microorganisms as drivers of plant–soil feedbacks within the subarctic tundra meadow. Journal of Ecology. 2022;110(2):466-
78.
Bag P, Lihavainen J, Delhomme N, Riquelme T,
Robinson KM, Jansson S. An atlas of the Norway
spruce needle seasonal transcriptome. Plant J.
2021;108(6):1815-29.
Calleja-Rodriguez A, Chen Z, Suontama M, Pan
J, Wu HX. Genomic Predictions With Nonadditive
Effects Improved Estimates of Additive Effects and
Predictions of Total Genetic Values in. Front Plant Sci.
2021;12:666820.
Capo E, Ninnes S, Domaizon I, Bertilsson S, Bigler C,
Wang XR, et al. Landscape Setting Drives the Microbial
Eukaryotic Community Structure in Four Swedish
Mountain Lakes over the Holocene. Microorganisms.
2021;9(2).
Castro D, Schneider AN, Holmlund M, Näsholm
T, Street NR, Hurry V. Effects of Early, Small-Scale
Nitrogen Addition on Germination and Early Growth
of Scots Pine (Pinus sylvestris) Seedlings and on
the Recruitment of the Root-Associated Fungal
Community. Forests. 2021;12(11):1589.
Cheng SP, Jia KH, Liu H, Zhang RG, Li ZC, Zhou SS, et
al. Haplotype-resolved genome assembly and allelespecific gene expression in cultivated ginger. Hortic
Res. 2021;8(1):188.
Christie N, Mannapperuma C, Ployet R, van der
Merwe K, Mähler N, Delhomme N, et al. qtlXplorer: an
online systems genetics browser in the Eucalyptus
Genome Integrative Explorer (EucGenIE). BMC
Bioinformatics. 2021;22(1):595.
Fataftah N, Bag P, André D, Lihavainen J, Zhang
B, Ingvarsson PK, et al. GIGANTEA influences leaf
senescence in trees in two different ways. Plant Physiol.
2021;187(4):2435-50.
Haas JC, Vergara A, Serrano AR, Mishra S, Hurry V,
Street NR. Candidate regulators and target genes of
drought stress in needles and roots of Norway spruce.
Tree Physiol. 2021;41(7):1230-46.
Hall D, Olsson J, Zhao W, Kroon J, Wennström U,
Wang XR. Divergent patterns between phenotypic
and genetic variation in Scots pine. Plant Commun.
2021;2(1):100139.
Jia KH, Liu H, Zhang RG, Xu J, Zhou SS, Jiao SQ,
et al. Chromosome-scale assembly and evolution of
the tetraploid Salvia splendens (Lamiaceae) genome.
Hortic Res. 2021;8(1):177.
Lihavainen J, Edlund E, Björkén L, Bag P, Robinson
KM, Jansson S. Stem girdling affects the onset of
autumn senescence in aspen in interaction with
metabolic signals. Physiol Plant. 2021;172(1):201-17.
Liu H, Yan XM, Wang XR, Zhang DX, Zhou Q, Shi TL,
et al. Centromere-Specific Retrotransposons and VeryLong-Chain Fatty Acid Biosynthesis in the Genome of
Yellowhorn (Front Plant Sci. 2021;12:766389.
Rendón-Anaya M, Wilson J, Sveinsson S,
Fedorkov A, Cottrell J, Bailey MES, et al. Adaptive
Introgression Facilitates Adaptation to High Latitudes
in European Aspen (Populus tremula L.). Mol Biol Evol.
2021;38(11):5034-50.
Robinson KM, Möller L, Bhalerao RP, Hertzberg M,
Nilsson O, Jansson S. Variation in non-target traits in
genetically modified hybrid aspens does not exceed
natural variation. New Biotechnology. 2021;64:27-36.
T4F - Department of Plant Physiology, Umeå Universitet
55
Samils B, Kaitera J, Persson T, Stenlid J, Barklund P.
Relationship and genetic structure among autoecious
and heteroecious populations of Cronartium
pini in northern Fennoscandia. Fungal Ecology.
2021;50:101032.
Schneider AN, Sundh J, Sundström G, Richau K,
Delhomme N, Grabherr M, et al. Comparative Fungal
Community Analyses Using Metatranscriptomics and
Internal Transcribed Spacer Amplicon Sequencing
from Norway Spruce. mSystems. 2021;6(1).
Xu J, Nie S, Xu CQ, Liu H, Jia KH, Zhou SS, et al. UVB-induced molecular mechanisms of stress physiology
responses in the major northern Chinese conifer Pinus
tabuliformis Carr. Tree Physiol. 2021;41(7):1247-63.
Castro D, Schneider AN, Holmlund M, Näsholm
T, Street NR, Hurry V. Effects of Early, Small-Scale
Nitrogen Addition on Germination and Early Growth
of Scots Pine (Pinus sylvestris) Seedlings and on
the Recruitment of the Root-Associated Fungal
Community. Forests. 2021;12(11):1589.
Haas JC, Vergara A, Serrano AR, Mishra S, Hurry V,
Street NR. Candidate regulators and target genes of
drought stress in needles and roots of Norway spruce.
Tree Physiol. 2021;41(7):1230-46.
Le K, Egertsdotter U. Scale-up of Somatic
Embryogenesis Plant Production of Hybrid Larch (Larix
x eurolepis) Using Temporary Immersion Bioreactors.
. In Vitro Cellular & Developmental Biology-Animal,
57(SUPPL 1): S38–S39.
Ranade SS, Egertsdotter U. In silico characterization
of putative gene homologues involved in somatic
embryogenesis suggests that some conifer species
may lack LEC2, one of the key regulators of initiation
of the process. BMC Genomics, 22(1): 392
Schneider AN, Sundh J, Sundström G, Richau K,
Delhomme N, Grabherr M, et al. Comparative Fungal
Community Analyses Using Metatranscriptomics and
Internal Transcribed Spacer Amplicon Sequencing
from Norway Spruce. mSystems. 2021;6(1).
Vergara A, Haas JC, Aro T, Stachula P, Street NR,
Hurry V. Norway spruce deploys tissue-specific
responses during acclimation to cold. Plant Cell
Environ. 2022;45(2):427-45.
Zhu L, Bloomfield KJ, Asao S, Tjoelker MG, Egerton
JJG, Hayes L, et al. Acclimation of leaf respiration
temperature responses across thermally contrasting
biomes. New Phytol. 2021;229(3):1312-25.
Samils B, Kaitera J, Persson T, Stenlid J, Barklund
P. Relationship and genetic structure among autoecious and heteroecious populations of Cronartium pini in northern Fennoscandia. Fungal Ecology.
2021;50:101032.
Appiah Mensah A, Holmström E, Petersson H, Nyström
K, Mason EG, Nilsson U. The millennium shift: Investigating
the relationship between environment and growth trends
of Norway spruce and Scots pine in northern Europe. Forest
Ecology and Management. 2021;481:118727.
Ara MT, Barbeito I, Elfving B, Johansson U, Nilsson U.
Varying rectangular spacing yields no difference in forest
growth and external wood quality in coniferous forest plantations. Forest Ecology and Management. 2021;489:119040.
Ara M, Barbeito I, Kalén C, Nilsson U. Regeneration failure of Scots pine changes the species composition of young
forests. Scandinavian Journal of Forest Research. 2021:1-9.
Barbeito I, Eskelson BNI, Carsky G. Trade-offs across
densities and mixture proportions in lodgepole pine-hybrid spruce plantations. Forest Ecology and Management.
2021;490:119095.
Dahlgren Lidman F, Holmström E, Lundmark T, fahlvik n.
Management of spontaneously regenerated mixed stands
of birch and Norway spruce in Sweden. Silva Fennica.
2021;55.
Hahn T, Eggers J, Subramanian N, Toraño Caicoya A, Uhl
E, Snäll T. Specified resilience value of alternative forest management adaptations to storms. Scandinavian Journal of
Forest Research. 2021;36(7-8):585-97.
Holmström E, Carlström T, Goude M, Lidman FD, Felton A.
Keeping mixtures of Norway spruce and birch in production
forests: insights from survey data. Scandinavian Journal of
Forest Research. 2021;36(2-3):155-63.
Lula M, Trubins R, Ekö PM, Johansson U, Nilsson U. Modelling effects of regeneration method on the growth and
profitability of Scots pine stands. Scandinavian Journal of
Forest Research. 2021;36(4):263-74.
Siipilehto J, Allen M, Nilsson U, Brunner A, Huuskonen S,
Haikarainen S, et al. Stand-level mortality models for Nordic
boreal forests. Silva Fennica. 2020;54.
Skovsgaard JP, Johansson U, Holmström E, Tune RM,
Ols C, Attocchi G. Effects of Thinning Practice, High Pruning
and Slash Management on Crop Tree and Stand Growth
in Young Even-Aged Stands of Planted Silver Birch (Betula
pendula Roth). Forests. 2021;12(2):225.
Capezza AJ, Muneer F, Prade T, Newson WR, Das
O, Lundman M, et al. Acylation of agricultural protein
biomass yields biodegradable superabsorbent plastics.
Communications Chemistry. 2021;4(1):52.
Ceresino EB, Johansson E, Sato HH, Plivelic TS, Hall SA,
Bez J, et al. Lupin Protein Isolate Structure Diversity in
Frozen-Cast Foams: Effects of Transglutaminases and Edible
Fats. Molecules. 2021;26(6):1717.
Guichard M, Holla S, Wernerová D, Grossmann G, Minina
EA. RoPod, a customizable toolkit for non-invasive root
imaging, reveals cell type-specific dynamics of plant
autophagy. bioRxiv. 2021:2021.12.07.471480.
Herneke A, Lendel C, Johansson D, Newson W, Hedenqvist
M, Karkehabadi S, et al. Protein Nanofibrils for Sustainable
Food–Characterization and Comparison of Fibrils from a
Broad Range of Plant Protein Isolates. ACS Food Science &
Technology. 2021;1(5):854-64.
Hussain A, Larsson H, Johansson E. Carotenoid Extraction
from Locally and Organically Produced Cereals Using
Saponification Method. Processes. 2021;9(5):783.
Jasieniecka-Gazarkiewicz K, Demski K, Gidda SK, Klińska
S, Niedojadło J, Lager I, et al. Subcellular Localization of
Acyl-CoA: Lysophosphatidylethanolamine Acyltransferases
(LPEATs) and the Effects of Knocking-Out and Overexpression
of Their Genes on Autophagy Markers Level and Life Span
of A. thaliana. International Journal of Molecular Sciences.
2021;22(6):3006.
Johansson E, Prieto-Linde ML, Larsson H. Locally Adapted
and Organically Grown Landrace and Ancient Spring
Cereals—A Unique Source of Minerals in the Human Diet.
Foods. 2021;10(2):393.
Johansson M, Xanthakis E, Langton M, Menzel C,
Vilaplana F, Johansson DP, et al. Mixed legume systems of
pea protein and unrefined lentil fraction: Textural properties
and microstructure. LWT. 2021;144:111212.
Kanagarajan S, Carlsson MLR, Chakane S, Kettisen K,
Smeds E, Kumar R, et al. Production of functional human fetal
hemoglobin in Nicotiana benthamiana for development of
hemoglobin-based oxygen carriers. International Journal of
Biological Macromolecules. 2021;184:955-66.
C4F - Crops for the Future
Klionsky DJ, Abdel-Aziz AK, Abdelfatah S, Abdellatif
M, Abdoli A, Abel S, et al. Guidelines for the use and
interpretation of assays for monitoring autophagy (4th
edition)1. Autophagy. 2021;17(1):1-382.
Kuktaite R, Repo-Carrasco-Valencia R, de Mendoza CC,
Plivelic TS, Hall S, Johansson E. Innovatively processed
quinoa (Chenopodium quinoa Willd.) food: chemistry,
structure and end-use characteristics. J Sci Food Agric. 2021.
Li X, Sandgrind S, Moss O, Guan R, Ivarson E, Wang ES, et
al. Efficient Protoplast Regeneration Protocol and CRISPR/
Cas9-Mediated Editing of Glucosinolate Transporter (GTR)
Genes in Rapeseed (Brassica napus L.). Frontiers in Plant
Science. 2021;12.
Minina EA, Dauphinee AN, Ballhaus F, Gogvadze V,
Smertenko AP, Bozhkov PV. Apoptosis is not conserved in
plants as revealed by critical examination of a model for
plant apoptosis-like cell death. BMC Biology. 2021;19(1):100.
Minina EA, Scheuring D, Askani J, Krueger F, Schumacher
K. Light at the end of the tunnel: FRAP assay reveals
that plant vacuoles start as a tubular network. bioRxiv.
2021:2021.05.13.444058.
Muneer F, Hovmalm HP, Svensson S-E, Newson
WR, Johansson E, Prade T. Economic viability of protein
concentrate production from green biomass of intermediate
crops: A pre-feasibility study. Journal of Cleaner Production.
2021;294:126304.
Nynäs A-L, Newson WR, Johansson E. Protein
Fractionation of Green Leaves as an Underutilized Food
Source—Protein Yield and the Effect of Process Parameters.
Foods. 2021;10(11):2533.
Ohlsson JA, Leong JX, Elander PH, Dauphinee AN,
Ballhaus F, Johansson J, et al. SPIRO – the automated
Petri plate imaging platform designed by biologists, for
biologists. bioRxiv. 2021:2021.03.15.435343.
Prade T, Muneer F, Berndtsson E, Nynäs A-L, Svensson
S-E, Newson WR, et al. Protein fractionation of broccoli
(Brassica oleracea, var. Italica) and kale (Brassica oleracea,
var. Sabellica) residual leaves — A pre-feasibility assessment
and evaluation of fraction phenol and fibre content. Food
and Bioproducts Processing. 2021;130:229-43.
63
Ramachandran P, Augstein F, Mazumdar S, Nguyen
TV, Minina EA, Melnyk CW, et al. Abscisic acid signaling
activates distinct VND transcription factors to promote
xylem differentiation in Arabidopsis. Current Biology.
2021;31(14):3153-61.e5.
Rojas-Lema S, Nilsson K, Trifol J, Langton M, GomezCaturla J, Balart R, et al. “Faba bean protein films reinforced
with cellulose nanocrystals as edible food packaging
material”. Food Hydrocolloids. 2021;121:107019.
Sandgrind S, Li X, Ivarson E, Ahlman A, Zhu L-H.
Establishment of an Efficient Protoplast Regeneration and
Transfection Protocol for Field Cress (Lepidium campestre).
Frontiers in Genome Editing. 2021;3.
Xia Y-H, Wang H-L, Ding B-J, Svensson GP, Jarl-Sunesson
C, Cahoon EB, et al. Green Chemistry Production of
Codlemone, the Sex Pheromone of the Codling Moth (Cydia
pomonella), by Metabolic Engineering of the Oilseed Crop
Camelina (Camelina sativa). Journal of Chemical Ecology.
2021;47(12):950-67.
Zhao X, Andersson M, Andersson R. A simplified method
of determining the internal structure of amylopectin from
barley starch without amylopectin isolation. Carbohydrate
Polymers. 2021;255:117503.
Zhao X, Jayarathna S, Turesson H, Fält A-S, Nestor G,
González MN, et al. Amylose starch with no detectable
branching developed through DNA-free CRISPR-Cas9
mediated mutagenesis of two starch branching enzymes in
potato. Scientific Reports. 2021;11(1):4311.
Eva Johansson, Professor, Programledare C4F
Institutionen för växtförädling
eva.johansson@slu.se, 040-415 562
Michael Gundale, Professor, Programledare T4F